********************
Function Reference
********************

.. contents:: Table of Contents


bids_utils
======================
.. automodule:: utils.bids_utils
     :members:

gen_graph
======================
.. automodule:: graph.gen_graph
     :members:

gen_reg
======================
.. automodule:: register.gen_reg
     :members:

gen_track
======================
.. automodule:: stats.gen_track
     :members:

gen_utils
======================
.. automodule:: utils.gen_utils
     :members:

loadGraphs
======================
.. automodule:: utils.loadGraphs
     :members:

mri_autoingest
======================
.. automodule:: utils.mri_autoingest
     :members:

multigraph_pipeline
======================
.. automodule:: scripts.multigraph_pipeline
     :members:

ndmg_bids
=======================
.. automodule:: scripts.ndmg_bids
     :members:

ndmg_cloud
======================
.. automodule:: scripts.ndmg_cloud
     :members:

ndmg_dwi_pipeline
======================
.. automodule:: scripts.ndmg_dwi_pipeline
     :members:

ndmg_setup
======================
.. automodule:: scripts.ndmg_setup
     :members:

nifti_to_binary
======================
.. automodule:: utils.nifti_to_binary
     :members:

nifti_to_png
======================
.. automodule:: utils.nifti_to_png
     :members:

plotly_helper
======================
.. automodule:: stats.plotly_helper
     :members:

preproc_anat
======================
.. automodule:: preproc.preproc_anat
     :members:

qa_adjacency
======================
.. automodule:: stats.qa_adjacency
     :members:

qa_fibers
======================
.. automodule:: stats.qa_fibers
     :members:

qa_graphs
======================
.. automodule:: stats.qa_graphs
     :members:

qa_tensor
======================
.. automodule:: stats.qa_tensor
     :members:

reg_utils
======================
.. automodule:: utils.reg_utils
     :members:

rescale_bvec
======================
.. automodule:: preproc.rescale_bvec
     :members:

s3_utils
======================
.. automodule:: utils.s3_utils
     :members:

.. toctree::
   :maxdepth: 2
   :caption: Contents: